Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001268annotation not available (471 aa)    
Predicted Functional Partners:
Atox1
Antioxidant 1 copper chaperone.
    
 0.996
Ccs
Copper chaperone for superoxide dismutase.
  
 0.987
Pdzd11
PDZ domain containing 11.
    
 0.960
ENSMSIP00000038225
annotation not available
    
 
 0.897
Cp
Ceruloplasmin.
  
 
 0.858
Atp7b
ATPase, Cu++ transporting, beta polypeptide.
     
  0.855
Slc31a1
Solute carrier family 31, member 1.
    
 
 0.792
Sod3
Superoxide dismutase 3, extracellular.
    
 0.784
ENSMSIP00000020903
annotation not available
    
 0.784
ENSMSIP00000027322
annotation not available
    
 0.784
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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