Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Fam229bFamily with sequence similarity 229, member B. (80 aa)    
Predicted Functional Partners:
Gng12
Guanine nucleotide binding protein (G protein), gamma 12.
      
 0.567
Magee2
Melanoma antigen, family E, 2.
      
 0.548
ENSMSIP00000029339
annotation not available
      
 0.548
2610002M06Rik
RIKEN cDNA 2610002M06 gene.
      
 0.533
Tmem60
Transmembrane protein 60.
      
 0.528
Sema4c
annotation not available
      
 0.526
4921507P07Rik
RIKEN cDNA 4921507P07 gene.
      
 0.522
Gask1a
Golgi associated kinase 1A.
      
 0.497
Prrt3
Proline-rich transmembrane protein 3.
      
 0.492
ENSMSIP00000003497
annotation not available
      
 0.490
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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