STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FkbplFK506 binding protein-like. (347 aa)    
Predicted Functional Partners:
Ccdc189
Coiled-coil domain containing 189.
   
    0.998
Ankrd49
Ankyrin repeat domain 49.
    
 0.975
Rbck1
RanBP-type and C3HC4-type zinc finger containing 1.
    
 
 0.950
Csnk1d
Casein kinase 1, delta.
    
  0.901
Fam107a
Family with sequence similarity 107, member A.
    
   0.870
Ak9
Adenylate kinase 9.
    
 0.855
Csnk1e
Casein kinase 1, epsilon.
    
  0.832
Tars2
threonyl-tRNA synthetase 2, mitochondrial (putative).
   
   0.831
Gtse1
G two S phase expressed protein 1.
     
 0.815
ENSMSIP00000004955
annotation not available
   
 0.790
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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