Timm50 protein (Mus spicilegus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Coexpression

Experiments

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[Homology]

Score

Timm50

Translocase of inner mitochondrial membrane 50. (353 aa)

Predicted Functional Partners:

Timm21

0.988

Timm44

0.987

Timm23

0.973

ENSMSIP00000002100

0.970

Timm17a

0.970

Tomm40

0.969

ENSMSIP00000001888

0.967

ENSMSIP00000002772

0.967

Tomm40l

0.965

ENSMSIP00000005024

0.960

Your Current Organism:

Mus spicilegus

NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMSIP00000001888	ENSMSIP00000002100	ENSMSIP00000001888	ENSMSIP00000002100	annotation not available	annotation not available	0.605
ENSMSIP00000001888	ENSMSIP00000002772	ENSMSIP00000001888	ENSMSIP00000002772	annotation not available	annotation not available	0.540
ENSMSIP00000001888	ENSMSIP00000005024	ENSMSIP00000001888	ENSMSIP00000005024	annotation not available	annotation not available	0.920
ENSMSIP00000001888	Timm17a	ENSMSIP00000001888	ENSMSIP00000019783	annotation not available	Translocase of inner mitochondrial membrane 17a.	0.605
ENSMSIP00000001888	Timm21	ENSMSIP00000001888	ENSMSIP00000028761	annotation not available	Translocase of inner mitochondrial membrane 21.	0.968
ENSMSIP00000001888	Timm23	ENSMSIP00000001888	ENSMSIP00000013801	annotation not available	Translocase of inner mitochondrial membrane 23.	0.961
ENSMSIP00000001888	Timm44	ENSMSIP00000001888	ENSMSIP00000037201	annotation not available	Translocase of inner mitochondrial membrane 44.	0.944
ENSMSIP00000001888	Timm50	ENSMSIP00000001888	ENSMSIP00000001286	annotation not available	Translocase of inner mitochondrial membrane 50.	0.967
ENSMSIP00000001888	Tomm40	ENSMSIP00000001888	ENSMSIP00000008182	annotation not available	Translocase of outer mitochondrial membrane 40.	0.619
ENSMSIP00000001888	Tomm40l	ENSMSIP00000001888	ENSMSIP00000029243	annotation not available	Translocase of outer mitochondrial membrane 40-like.	0.611
ENSMSIP00000002100	ENSMSIP00000001888	ENSMSIP00000002100	ENSMSIP00000001888	annotation not available	annotation not available	0.605
ENSMSIP00000002100	ENSMSIP00000002772	ENSMSIP00000002100	ENSMSIP00000002772	annotation not available	annotation not available	0.625
ENSMSIP00000002100	ENSMSIP00000005024	ENSMSIP00000002100	ENSMSIP00000005024	annotation not available	annotation not available	0.927
ENSMSIP00000002100	Timm17a	ENSMSIP00000002100	ENSMSIP00000019783	annotation not available	Translocase of inner mitochondrial membrane 17a.	0.543
ENSMSIP00000002100	Timm21	ENSMSIP00000002100	ENSMSIP00000028761	annotation not available	Translocase of inner mitochondrial membrane 21.	0.973
ENSMSIP00000002100	Timm23	ENSMSIP00000002100	ENSMSIP00000013801	annotation not available	Translocase of inner mitochondrial membrane 23.	0.965
ENSMSIP00000002100	Timm44	ENSMSIP00000002100	ENSMSIP00000037201	annotation not available	Translocase of inner mitochondrial membrane 44.	0.958
ENSMSIP00000002100	Timm50	ENSMSIP00000002100	ENSMSIP00000001286	annotation not available	Translocase of inner mitochondrial membrane 50.	0.970
ENSMSIP00000002100	Tomm40	ENSMSIP00000002100	ENSMSIP00000008182	annotation not available	Translocase of outer mitochondrial membrane 40.	0.693
ENSMSIP00000002100	Tomm40l	ENSMSIP00000002100	ENSMSIP00000029243	annotation not available	Translocase of outer mitochondrial membrane 40-like.	0.656