STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Id1Inhibitor of DNA binding 1, HLH protein. (148 aa)    
Predicted Functional Partners:
Tcf3
Transcription factor 3.
    
 
 0.975
Ets2
E26 avian leukemia oncogene 2, 3' domain.
     
 0.970
Myod1
Myogenic differentiation 1.
    
 
 0.965
Id3
Inhibitor of DNA binding 3.
   
 0.949
Thbs1
Thrombospondin 1.
    
 0.909
Tcf4
Transcription factor 4.
    
 
 0.907
Tcf12
Transcription factor 12.
    
 
 0.907
Rap1b
RAS related protein 1b.
     
  0.899
Id4
Inhibitor of DNA binding 4.
   
 
 0.879
Id2
Inhibitor of DNA binding 2.
   
 
 0.878
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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