Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Zfp777Zinc finger protein 777. (842 aa)    
Predicted Functional Partners:
Zfp212
Zinc finger protein 212.
   
   0.911
Zfp398
Zinc finger protein 398.
    
   0.840
Zfp282
Zinc finger protein 282.
   
 
 0.812
Zfp956
Zinc finger protein 956.
    
   0.730
Ak9
Adenylate kinase 9.
    
  0.694
Dnajb14
DnaJ heat shock protein family (Hsp40) member B14.
    
 
 0.499
Ttpal
Tocopherol (alpha) transfer protein-like.
    
 
 0.496
Ttpa
Tocopherol (alpha) transfer protein.
    
 
 0.496
Gtf2ird1
General transcription factor II I repeat domain-containing 1.
    
 
 0.494
Rnf24
Ring finger protein 24.
    
 
 0.488
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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