Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Sv2cSynaptic vesicle glycoprotein 2c. (778 aa)    
Predicted Functional Partners:
Lamc2
Laminin, gamma 2.
     
 0.918
Lamc1
Laminin, gamma 1.
     
 0.891
Lamb1
Laminin B1.
     
 0.890
ENSMSIP00000023277
annotation not available
     
 0.888
Lamb2
Laminin, beta 2.
     
 0.879
Lama4
Laminin, alpha 4.
     
 0.876
ENSMSIP00000005216
annotation not available
     
 0.876
ENSMSIP00000008658
annotation not available
     
 0.876
Lamb3
Laminin, beta 3.
     
 0.871
Sv2b
Synaptic vesicle glycoprotein 2 b.
   
 
  0.864
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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