Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ei24Etoposide induced 2.4 mRNA. (358 aa)    
Predicted Functional Partners:
Cryz
Crystallin, zeta.
     
  0.842
ENSMSIP00000030325
annotation not available
     
  0.842
Ttc37
Tetratricopeptide repeat domain 37.
      
 0.663
ENSMSIP00000022059
annotation not available
      
 0.575
Perp
PERP, TP53 apoptosis effector.
      
 0.574
Trim26
Tripartite motif-containing 26.
      
 0.542
Trim3
Tripartite motif-containing 3.
      
 0.537
Trappc10
Trafficking protein particle complex 10.
      
 0.515
Vmp1
Vacuole membrane protein 1.
      
 0.490
ENSMSIP00000014648
annotation not available
      
 0.490
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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