STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lama4Laminin, alpha 4. (1816 aa)    
Predicted Functional Partners:
Lamc1
Laminin, gamma 1.
   
0.986
ENSMSIP00000023277
annotation not available
   
0.977
Itga7
Integrin alpha 7.
    
 0.968
Itga6
Integrin alpha 6.
    
 0.959
Itgb1
Integrin beta 1 (fibronectin receptor beta).
   
 0.955
Lamc2
Laminin, gamma 2.
   
0.950
Megf11
Multiple EGF-like-domains 11.
    
  0.940
Lamb3
Laminin, beta 3.
   
0.936
Cd44
CD44 antigen.
    
 0.933
Itga3
Integrin alpha 3.
    
 0.930
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.