STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prrt1Proline-rich transmembrane protein 1. (306 aa)    
Predicted Functional Partners:
Wdr90
WD repeat domain 90.
    
 0.722
Cacng8
Calcium channel, voltage-dependent, gamma subunit 8.
  
 
 
 0.651
Tmem59
Transmembrane protein 59.
   
 0.643
ENSMSIP00000014716
annotation not available
    
 0.622
Gak
Cyclin G associated kinase.
    
 0.617
Tax1bp1
Tax1 (human T cell leukemia virus type I) binding protein 1.
    
 
 0.596
ENSMSIP00000036268
annotation not available
   
 0.575
Dennd5a
DENN/MADD domain containing 5A.
     
 0.561
Cnih2
Cornichon family AMPA receptor auxiliary protein 2.
    
 
 0.557
Mrpl39
Mitochondrial ribosomal protein L39.
    
 
 0.554
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.