Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Slc35f5Solute carrier family 35, member F5. (524 aa)    
Predicted Functional Partners:
Atp5e
ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.
    
   0.664
Mrpl24
Mitochondrial ribosomal protein L24.
     
  0.654
Slc22a15
Solute carrier family 22 (organic anion/cation transporter), member 15.
      
 0.583
Slc7a2
Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2.
      
 0.577
ENSMSIP00000000234
annotation not available
    
   0.572
Pdhx
Pyruvate dehydrogenase complex, component X.
    
   0.572
ENSMSIP00000007506
annotation not available
    
   0.572
Gigyf1
GRB10 interacting GYF protein 1.
      
 0.570
Ankrd12
Ankyrin repeat domain 12.
    
 
 0.543
Col5a3
Collagen, type V, alpha 3.
      
 0.537
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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