STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Basp1Brain abundant, membrane attached signal protein 1. (226 aa)    
Predicted Functional Partners:
Atp5a1
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1.
    
 0.903
Cops4
COP9 signalosome subunit 4.
    
  0.894
Gps1
G protein pathway suppressor 1.
    
  0.894
Epb41l2
Erythrocyte membrane protein band 4.1 like 2.
    
  0.893
Cops6
COP9 signalosome subunit 6.
    
  0.892
Tmod1
Tropomodulin 1.
    
  0.891
Cops5
COP9 signalosome subunit 5.
    
  0.889
Cops8
COP9 signalosome subunit 8.
    
  0.889
Myh9
Myosin, heavy polypeptide 9, non-muscle.
    
  0.885
Hspa5
Heat shock protein 5.
    
 0.882
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.