Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Atxn1Ataxin 1. (791 aa)    
Predicted Functional Partners:
Cic
Capicua transcriptional repressor.
    
 
 0.979
Ywhaz
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide.
    
 
 0.946
Kat5
K(lysine) acetyltransferase 5.
    
 0.928
Rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.907
Atxn1l
Ataxin 1-like.
    
 0.906
Ist1
Increased sodium tolerance 1 homolog (yeast).
    
 0.883
Rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
  0.880
Pum1
Pumilio RNA-binding family member 1.
     
 0.876
Kat7
K(lysine) acetyltransferase 7.
    
 0.873
Kat8
K(lysine) acetyltransferase 8.
    
 0.873
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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