STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001333annotation not available (254 aa)    
Predicted Functional Partners:
Ttc8
Tetratricopeptide repeat domain 8.
    
 
 0.643
Bbs5
Bardet-Biedl syndrome 5 (human).
    
 
 0.611
Bbs7
Bardet-Biedl syndrome 7 (human).
    
 
 0.607
Bbs4
Bardet-Biedl syndrome 4 (human).
    
 
 0.599
Bbs1
Bardet-Biedl syndrome 1 (human).
    
 
 0.582
Zmym6
Zinc finger, MYM-type 6.
      
 0.581
Srek1ip1
Splicing regulatory glutamine/lysine-rich protein 1interacting protein 1.
      
 0.544
ENSMSIP00000027498
annotation not available
      
 0.504
Dclre1b
DNA cross-link repair 1B.
      
 0.489
Bbs10
Bardet-Biedl syndrome 10 (human).
    
 
 0.456
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.