STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RhoRhodopsin. (348 aa)    
Predicted Functional Partners:
Gnat1
Guanine nucleotide binding protein, alpha transducing 1.
   
 0.999
Sag
S-antigen, retina and pineal gland (arrestin).
   
 0.999
Grk1
G protein-coupled receptor kinase 1.
    
 0.996
Gnat2
Guanine nucleotide binding protein, alpha transducing 2.
   
 0.996
Gnat3
Guanine nucleotide binding protein, alpha transducing 3.
   
 0.994
Rcvrn
Recoverin.
   
 
 0.994
ENSMSIP00000032816
annotation not available
   
 0.988
Arrb2
Arrestin, beta 2.
   
 0.987
ENSMSIP00000022414
annotation not available
   
 0.985
Gng11
Guanine nucleotide binding protein (G protein), gamma 11.
   
 0.972
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.