STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AgaAspartylglucosaminidase. (346 aa)    
Predicted Functional Partners:
Asnsd1
Asparagine synthetase domain containing 1.
     
 0.750
Asns
Asparagine synthetase.
     
 0.750
Tmem109
Transmembrane protein 109.
    
 0.687
Otc
Ornithine transcarbamylase.
     
 0.684
Agxt
Alanine-glyoxylate aminotransferase.
     
 0.606
Gpt2
Glutamic pyruvate transaminase (alanine aminotransferase) 2.
    
 0.603
Gpt
Glutamic pyruvic transaminase, soluble.
    
 0.603
Ppat
Phosphoribosyl pyrophosphate amidotransferase.
     
 0.578
Kyat3
Kynurenine aminotransferase 3.
   
 0.568
Sdha
Succinate dehydrogenase complex, subunit A, flavoprotein (Fp).
    
  0.562
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.