STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AgaAspartylglucosaminidase. (346 aa)    
Predicted Functional Partners:
Mob4
MOB family member 4, phocein.
    
   0.735
Rab1b
RAB1B, member RAS oncogene family.
     
  0.727
Rab1a
RAB1A, member RAS oncogene family.
     
  0.727
Asnsd1
Asparagine synthetase domain containing 1.
     
 0.691
Asns
Asparagine synthetase.
     
 0.691
Fh1
Fumarate hydratase 1.
     
  0.679
Otc
Ornithine transcarbamylase.
     
 0.672
C4b
Complement component 4B (Chido blood group).
   
   0.664
Qtrt2
Queuine tRNA-ribosyltransferase accessory subunit 2.
    
   0.664
Ampd3
Adenosine monophosphate deaminase 3.
    
   0.664
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.