Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Rsph4aRadial spoke head 4 homolog A (Chlamydomonas). (709 aa)    
Predicted Functional Partners:
Rsph9
Radial spoke head 9 homolog (Chlamydomonas).
  
 0.995
Rsph1
Radial spoke head 1 homolog (Chlamydomonas).
   
 0.982
Dnaic1
Dynein, axonemal, intermediate chain 1.
   
 
 0.980
Dnajb13
DnaJ heat shock protein family (Hsp40) member B13.
   
 0.969
Nme5
NME/NM23 family member 5.
   
 0.957
Dnaic2
Dynein, axonemal, intermediate chain 2.
   
 
 0.944
Ranbp2
RAN binding protein 2.
    
 0.943
Dnah5
Dynein, axonemal, heavy chain 5.
   
 
 0.943
Ttc29
Tetratricopeptide repeat domain 29.
   
 
 0.930
Nme8
NME/NM23 family member 8.
   
 
 0.926
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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