STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001374annotation not available (121 aa)    
Predicted Functional Partners:
ENSMSIP00000007366
annotation not available
   
 0.997
Vps36
Vacuolar protein sorting 36.
   
 0.996
Chmp6
Charged multivesicular body protein 6.
    
 0.990
ENSMSIP00000037347
annotation not available
    
 0.988
5730455P16Rik
RIKEN cDNA 5730455P16 gene.
    
 0.984
Chmp4b
Charged multivesicular body protein 4B.
    
 0.979
Chmp4c
Charged multivesicular body protein 4C.
    
 0.974
ENSMSIP00000029079
annotation not available
   
 0.971
Uevld
UEV and lactate/malate dehyrogenase domains.
    
 0.965
Chmp2a
Charged multivesicular body protein 2A.
   
 0.955
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.