Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H1f8H1.8 linker histone. (304 aa)    
Predicted Functional Partners:
ENSMSIP00000002142
annotation not available
   
 
 0.816
H2az2
H2A.Z histone variant 2.
   
 
 0.816
ENSMSIP00000033655
annotation not available
    
   0.766
Noc2l
NOC2 like nucleolar associated transcriptional repressor.
    
   0.762
Actl6b
Actin-like 6B.
    
 
 0.745
Actl6a
Actin-like 6A.
    
 
 0.745
H1f7
H1.7 linker histone.
      
 0.741
H1f6
H1.6 linker histone, cluster member.
   
 0.706
ENSMSIP00000001525
annotation not available
   
 0.685
ENSMSIP00000007521
annotation not available
    
   0.684
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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