Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UmodUromodulin. (642 aa)    
Predicted Functional Partners:
Aqp2
Aquaporin 2.
   
 
 0.844
Cela3a
Chymotrypsin-like elastase family, member 3A.
   
 0.844
Aqp5
Aquaporin 5.
   
 
 0.833
Ppy
Pancreatic polypeptide.
   
  0.820
Slc12a1
Solute carrier family 12, member 1.
   
 
 0.792
Egf
Epidermal growth factor.
   
 0.789
Itgb6
Integrin beta 6.
    
 0.754
Cel
Carboxyl ester lipase.
   
   0.686
Cela2a
Chymotrypsin-like elastase family, member 2A.
   
 0.677
Ctrc
Chymotrypsin C (caldecrin).
   
 0.677
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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