Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001408annotation not available (249 aa)    
Predicted Functional Partners:
Lin28a
Lin-28 homolog A (C. elegans).
   
 
 0.639
Fasn
Fatty acid synthase.
  
 0.639
Aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.620
Hsdl2
Hydroxysteroid dehydrogenase like 2.
   
 0.617
Dhx9
DEAH (Asp-Glu-Ala-His) box polypeptide 9.
    
   0.582
ENSMSIP00000016700
annotation not available
  
 0.540
Ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
  
 0.540
Palb2
Partner and localizer of BRCA2.
  
 0.540
ENSMSIP00000017802
annotation not available
  
     0.475
Cryl1
Crystallin, lambda 1.
  
 
 0.472
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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