STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neil3Nei like 3 (E. coli). (606 aa)    
Predicted Functional Partners:
Nthl1
Nth (endonuclease III)-like 1 (E.coli).
   
  
 0.968
Coasy
Coenzyme A synthase.
  
  
 0.938
Dcakd
dephospho-CoA kinase domain containing.
  
  
 0.938
Fen1
Flap structure specific endonuclease 1.
  
  
 0.921
Helq
Helicase, POLQ-like.
  
  
 0.886
Polq
Polymerase (DNA directed), theta.
  
  
 0.886
Polg
Polymerase (DNA directed), gamma.
  
  
 0.886
Poln
DNA polymerase N.
  
  
 0.886
Gen1
GEN1, Holliday junction 5' flap endonuclease.
  
  
 0.882
ENSMSIP00000020469
annotation not available
  
  
 0.882
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.