STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pknox2Pbx/knotted 1 homeobox 2. (474 aa)    
Predicted Functional Partners:
ENSMSIP00000017206
annotation not available
    
 0.947
Pbx2
Pre B cell leukemia homeobox 2.
    
 0.938
Pbx1
Pre B cell leukemia homeobox 1.
    
 0.935
Pbx4
Pre B cell leukemia homeobox 4.
    
 0.935
Lmx1b
LIM homeobox transcription factor 1 beta.
    
 
 0.931
Hoxb1
Homeobox B1.
    
 0.882
Lmx1a
LIM homeobox transcription factor 1 alpha.
    
 
 0.818
B230219D22Rik
RIKEN cDNA B230219D22 gene.
    
   0.818
Vwa5a
Von Willebrand factor A domain containing 5A.
   
   0.751
AW551984
Expressed sequence AW551984.
   
   0.751
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.