STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001430annotation not available (469 aa)    
Predicted Functional Partners:
Pom121
Nuclear pore membrane protein 121.
     
  0.848
ENSMSIP00000000785
annotation not available
     
  0.647
ENSMSIP00000013996
annotation not available
     
  0.647
Gmppa
GDP-mannose pyrophosphorylase A.
      
 0.522
Prss16
Protease, serine 16 (thymus).
      
 0.492
Ccdc188
Coiled-coil domain containing 188.
      
 0.483
Slc17a1
Solute carrier family 17 (sodium phosphate), member 1.
      
 0.467
Ccdc110
Coiled-coil domain containing 110.
      
 0.441
Nt5c2
5'-nucleotidase, cytosolic II.
      
 0.416
Zbtb45
Zinc finger and BTB domain containing 45.
      
 0.409
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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