Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ErmnErmin, ERM-like protein. (280 aa)    
Predicted Functional Partners:
Ltn1
Listerin E3 ubiquitin protein ligase 1.
   
 0.963
Tcf25
Transcription factor 25 (basic helix-loop-helix).
   
 0.957
ENSMSIP00000017612
annotation not available
   
  
 0.934
Rpl8
Ribosomal protein L8.
    
  0.917
Hapln2
Hyaluronan and proteoglycan link protein 2.
   
  
 0.901
Rpl4
Ribosomal protein L4.
    
  0.884
Cul7
Cullin 7.
    
  0.880
Mrpl2
Mitochondrial ribosomal protein L2.
    
  0.880
Mobp
Myelin-associated oligodendrocytic basic protein.
   
  
 0.864
Ankzf1
Ankyrin repeat and zinc finger domain containing 1.
   
 0.862
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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