STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ErmnErmin, ERM-like protein. (280 aa)    
Predicted Functional Partners:
Ltn1
Listerin E3 ubiquitin protein ligase 1.
    
 0.993
Tcf25
Transcription factor 25 (basic helix-loop-helix).
    
 0.950
ENSMSIP00000017612
annotation not available
   
  
 0.946
Mobp
Myelin-associated oligodendrocytic basic protein.
   
  
 0.939
Ufd1
Ubiquitin recognition factor in ER-associated degradation 1.
    
 0.921
Hapln2
Hyaluronan and proteoglycan link protein 2.
   
  
 0.912
Nploc4
NPL4 homolog, ubiquitin recognition factor.
    
 0.893
Faap100
Fanconi anemia core complex associated protein 100.
    
 0.893
Cul7
Cullin 7.
    
   0.868
Mrpl2
Mitochondrial ribosomal protein L2.
    
   0.868
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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