Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
ChrndCholinergic receptor, nicotinic, delta polypeptide. (520 aa)    
Predicted Functional Partners:
Chrna1
Cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle).
  
0.985
Chrnb1
Cholinergic receptor, nicotinic, beta polypeptide 1 (muscle).
  
0.982
Chrng
Cholinergic receptor, nicotinic, gamma polypeptide.
   
0.980
Chrne
Cholinergic receptor, nicotinic, epsilon polypeptide.
   
 0.968
Chrna2
Cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal).
    
0.922
Lynx1
Ly6/neurotoxin 1.
    
 0.920
Chrna4
Cholinergic receptor, nicotinic, alpha polypeptide 4.
    
 
0.915
Chrnb3
Cholinergic receptor, nicotinic, beta polypeptide 3.
  
 
0.903
Chrnb4
Cholinergic receptor, nicotinic, beta polypeptide 4.
   
0.901
Chrnb2
Cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal).
   
0.901
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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