Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001495annotation not available (244 aa)    
Predicted Functional Partners:
Cpa1
Carboxypeptidase A1, pancreatic.
   
 
 0.986
Cbs
Cystathionine beta-synthase.
      
 0.872
Dbh
Dopamine beta hydroxylase.
      
 0.872
Spink1
Serine peptidase inhibitor, Kazal type 1.
   
 0.769
Clps
Colipase, pancreatic.
   
    0.701
Palb2
Partner and localizer of BRCA2.
     
 0.699
1700001P01Rik
RIKEN cDNA 1700001P01 gene.
    
 
 0.691
ENSMSIP00000002357
annotation not available
    
 0.617
Mgam
Maltase-glucoamylase.
    
 0.617
Ephb6
Eph receptor B6.
    
 0.607
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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