Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tmem234Transmembrane protein 234. (140 aa)    
Predicted Functional Partners:
Tmem63c
Transmembrane protein 63c.
      
 0.619
Slc35e4
Solute carrier family 35, member E4.
      
 0.574
Tmem241
Transmembrane protein 241.
      
 0.573
ENSMSIP00000001333
annotation not available
      
 0.531
Zfp185
Zinc finger protein 185.
      
 0.530
Rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
      
 0.524
ENSMSIP00000035945
annotation not available
      
 0.488
Mmadhc
Methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria.
      
 0.472
Txlna
Taxilin alpha.
      
 0.467
Rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
      
 0.467
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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