Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lin28aLin-28 homolog A (C. elegans). (209 aa)    
Predicted Functional Partners:
Tut4
Terminal uridylyl transferase 4.
    
 0.964
Tut7
Terminal uridylyl transferase 7.
    
 0.953
Ebna1bp2
EBNA1 binding protein 2.
   
   0.933
Upf1
UPF1 regulator of nonsense transcripts homolog (yeast).
    
 
 0.931
Pop1
Processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae).
    
   0.928
Xrn2
5'-3' exoribonuclease 2.
    
 
 0.914
Igf2bp3
Insulin-like growth factor 2 mRNA binding protein 3.
   
 
 0.903
Pou5f1
POU domain, class 5, transcription factor 1.
   
 0.901
ENSMSIP00000017471
annotation not available
   
 0.901
Lin28b
Lin-28 homolog B (C. elegans).
   
   0.863
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.