STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001522annotation not available (203 aa)    
Predicted Functional Partners:
Nsmce1
NSE1 homolog, SMC5-SMC6 complex component.
   
 0.919
Smc6
Structural maintenance of chromosomes 6.
   
 0.918
Smc5
Structural maintenance of chromosomes 5.
   
 0.918
Nsmce2
NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.917
Eid3
EP300 interacting inhibitor of differentiation 3.
   
 0.875
Nsmce4a
NSE4 homolog A, SMC5-SMC6 complex component.
   
 0.875
Ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
  0.830
Ranbp2
RAN binding protein 2.
   
  0.651
Smc3
Structural maintenance of chromosomes 3.
    
 0.582
Npas4
Neuronal PAS domain protein 4.
    
 0.572
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.