Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001522annotation not available (203 aa)    
Predicted Functional Partners:
Nsmce1
NSE1 homolog, SMC5-SMC6 complex component.
   
 0.881
Smc6
Structural maintenance of chromosomes 6.
   
 0.843
Smc5
Structural maintenance of chromosomes 5.
   
 0.840
Nsmce2
NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.835
Eid3
EP300 interacting inhibitor of differentiation 3.
   
 0.825
Nsmce4a
NSE4 homolog A, SMC5-SMC6 complex component.
   
 0.825
Tulp2
Tubby-like protein 2.
    
 
 0.616
Fam209
Family with sequence similarity 209.
      
 0.594
Npas4
Neuronal PAS domain protein 4.
    
 0.566
1700022I11Rik
RIKEN cDNA 1700022I11 gene.
    
 
 0.552
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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