STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001525annotation not available (103 aa)    
Predicted Functional Partners:
H2bc18
H2B clustered histone 18.
 
 
 0.999
Rbbp7
Retinoblastoma binding protein 7, chromatin remodeling factor.
    
 0.998
Brdt
Bromodomain, testis-specific.
    
 
 0.997
ENSMSIP00000025769
annotation not available
 
 
 0.995
ENSMSIP00000002609
annotation not available
 
 
 0.992
H2ac19
H2A clustered histone 19.
 
 
 0.992
Orc1
Origin recognition complex, subunit 1.
    
 0.992
H2aw
H2A.W histone.
 
 
 0.992
Eed
Embryonic ectoderm development.
    
 0.991
Cenpa
Centromere protein A.
   
 0.990
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.