STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Defb25Defensin beta 25. (76 aa)    
Predicted Functional Partners:
Defb42
Defensin beta 42.
  
  
 0.902
Defb18
Defensin beta 18.
  
  
 0.891
Defb48
Defensin beta 48.
  
  
 0.869
ENSMSIP00000016301
annotation not available
  
  
 0.866
Defb47
Defensin beta 47.
  
  
 0.861
Defb19
Defensin beta 19.
     
 0.797
Defb36
Defensin beta 36.
     
 0.794
ENSMSIP00000001621
annotation not available
     
 0.754
ENSMSIP00000001626
annotation not available
     
 0.747
Defb1
Defensin beta 1.
     
 0.690
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.