Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Krt35Keratin 35. (455 aa)    
Predicted Functional Partners:
Krt32
Keratin 32.
   
 
  0.966
Krt24
Keratin 24.
   
 
  0.919
Krt27
Keratin 27.
   
  0.906
Krt71
Keratin 71.
   
 0.880
ENSMSIP00000011856
annotation not available
    
  0.873
Krtap11-1
Keratin associated protein 11-1.
   
  
 0.837
ENSMSIP00000011138
annotation not available
   
 0.817
Ak9
Adenylate kinase 9.
    
 0.805
Krtap3-1
Keratin associated protein 3-1.
   
 
 0.788
Unc79
Unc-79 homolog.
    
 0.762
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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