STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Samd9lSterile alpha motif domain containing 9-like. (1579 aa)    
Predicted Functional Partners:
Ifi44
Interferon-induced protein 44.
   
 
 0.937
Stat1
Signal transducer and activator of transcription 1.
   
 
 0.926
Parp9
Poly (ADP-ribose) polymerase family, member 9.
   
 
 0.914
Epsti1
Epithelial stromal interaction 1 (breast).
   
  
 0.911
ENSMSIP00000026788
annotation not available
   
 
 0.890
ENSMSIP00000008042
annotation not available
   
 
 0.880
ENSMSIP00000000180
annotation not available
   
   0.859
A630001G21Rik
RIKEN cDNA A630001G21 gene.
   
   0.812
Ddx58
DEAD (Asp-Glu-Ala-Asp) box polypeptide 58.
   
  
 0.806
Ifih1
Interferon induced with helicase C domain 1.
   
  
 0.771
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.