Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ifrd1Interferon-related developmental regulator 1. (449 aa)    
Predicted Functional Partners:
Commd10
COMM domain containing 10.
   
 0.919
Commd2
COMM domain containing 2.
    
 0.911
ENSMSIP00000008449
annotation not available
    
 0.909
ENSMSIP00000038225
annotation not available
    
 0.900
ENSMSIP00000021853
annotation not available
    
 0.892
Commd3
COMM domain containing 3.
    
 0.882
Commd9
COMM domain containing 9.
   
 0.881
ENSMSIP00000015477
annotation not available
    
 0.833
ENSMSIP00000036093
annotation not available
    
 0.833
Myod1
Myogenic differentiation 1.
    
 
 0.820
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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