STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ifrd1Interferon-related developmental regulator 1. (449 aa)    
Predicted Functional Partners:
Fau
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).
    
  0.968
Commd10
COMM domain containing 10.
    
 0.930
Commd2
COMM domain containing 2.
    
 0.930
ENSMSIP00000038225
annotation not available
    
 0.922
ENSMSIP00000008449
annotation not available
    
 0.907
ENSMSIP00000021718
annotation not available
    
  0.905
ENSMSIP00000023026
annotation not available
    
  0.905
Rps27a
Ribosomal protein S27A.
    
  0.905
Rpl8
Ribosomal protein L8.
    
 
 0.885
ENSMSIP00000003263
annotation not available
    
  0.882
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.