Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S100a9S100 calcium binding protein A9 (calgranulin B). (113 aa)    
Predicted Functional Partners:
S100a8
S100 calcium binding protein A8 (calgranulin A).
  
0.999
S100a7a
S100 calcium binding protein A7A.
   
 0.962
S100a6
S100 calcium binding protein A6 (calcyclin).
   
 
 0.916
S100a3
S100 calcium binding protein A3.
    
 0.903
S100a14
S100 calcium binding protein A14.
   
 0.902
S100a1
S100 calcium binding protein A1.
    
 0.894
Tchhl1
Trichohyalin-like 1.
     
 0.892
ENSMSIP00000001234
annotation not available
   
 
 0.890
S100a16
S100 calcium binding protein A16.
     
 0.890
S100a4
S100 calcium binding protein A4.
     
 0.890
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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