Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Pde6cPhosphodiesterase 6C, cGMP specific, cone, alpha prime. (861 aa)    
Predicted Functional Partners:
Pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma.
   
 0.976
Gnat2
Guanine nucleotide binding protein, alpha transducing 2.
   
 
 0.957
ENSMSIP00000021202
annotation not available
   
 
 0.951
Pde3a
Phosphodiesterase 3A, cGMP inhibited.
    
 0.924
Cngb3
Cyclic nucleotide gated channel beta 3.
   
 0.921
Nt5e
5' nucleotidase, ecto.
     
 0.920
Gucy2c
Guanylate cyclase 2c.
    
 0.920
Adcy3
Adenylate cyclase 3.
    
 0.918
Adcy6
Adenylate cyclase 6.
    
 0.916
Adcy5
Adenylate cyclase 5.
    
 0.916
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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