STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pde6cPhosphodiesterase 6C, cGMP specific, cone, alpha prime. (861 aa)    
Predicted Functional Partners:
Guk1
Guanylate kinase 1.
   
 
 0.949
Pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma.
   
 0.938
Gucy2d
Guanylate cyclase 2d.
   
 0.929
Gnat2
Guanine nucleotide binding protein, alpha transducing 2.
   
 0.921
Gucy2c
Guanylate cyclase 2c.
    
 0.911
Adcy6
Adenylate cyclase 6.
    
 0.908
Adcy5
Adenylate cyclase 5.
    
 0.908
ENSMSIP00000031615
annotation not available
   
 0.908
Adcy3
Adenylate cyclase 3.
    
 0.908
Nt5e
5' nucleotidase, ecto.
     
 0.902
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.