Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001586annotation not available (66 aa)    
Predicted Functional Partners:
Defb1
Defensin beta 1.
     
 0.756
Defb25
Defensin beta 25.
     
 0.743
Defb19
Defensin beta 19.
   
 
 0.716
Defb36
Defensin beta 36.
     
 0.676
ENSMSIP00000001626
annotation not available
   
 
 0.676
Defb48
Defensin beta 48.
     
 0.646
ENSMSIP00000001633
annotation not available
   
 
 0.614
Defb43
Defensin beta 43.
     
 0.589
Defb42
Defensin beta 42.
     
 0.582
Defb41
Defensin beta 41.
   
 
 0.582
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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