STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tmem218Transmembrane protein 218. (115 aa)    
Predicted Functional Partners:
Ldlrad1
Low density lipoprotein receptor class A domain containing 1.
    
   0.765
Tmem17
Transmembrane protein 17.
   
  
 0.648
Mfrp
Membrane frizzled-related protein.
      
 0.621
Wbp1
WW domain binding protein 1.
      
 0.551
ENSMSIP00000011132
annotation not available
      
 0.548
Tmem67
Transmembrane protein 67.
      
 0.540
Tmem237
Transmembrane protein 237.
      
 0.539
ENSMSIP00000036610
annotation not available
      
 0.539
Tmem231
Transmembrane protein 231.
      
 0.536
Mob3c
MOB kinase activator 3C.
      
 0.489
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.