STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001590annotation not available (1212 aa)    
Predicted Functional Partners:
Aktip
Thymoma viral proto-oncogene 1 interacting protein.
    
 0.984
Hook3
Hook microtubule tethering protein 3.
    
 
0.968
Fam160a1
Family with sequence similarity 160, member A1.
    
 0.893
Fam160a2
Family with sequence similarity 160, member A2.
    
 0.893
Vps18
VPS18 CORVET/HOPS core subunit.
    
 0.882
Vps41
VPS41 HOPS complex subunit.
    
  0.878
Vps16
VSP16 CORVET/HOPS core subunit.
    
  0.878
Vps39
VPS39 HOPS complex subunit.
    
  0.877
Ckap5
Cytoskeleton associated protein 5.
    
 
 0.506
ENSMSIP00000034910
annotation not available
    
 0.504
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.