STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001596annotation not available (199 aa)    
Predicted Functional Partners:
ENSMSIP00000037621
annotation not available
    
 0.829
ENSMSIP00000037640
annotation not available
    
 0.829
Shank1
SH3 and multiple ankyrin repeat domains 1.
    
  0.732
Shank3
SH3 and multiple ankyrin repeat domains 3.
    
  0.732
Grin1
Glutamate receptor, ionotropic, NMDA1 (zeta 1).
   
 0.693
Ak9
Adenylate kinase 9.
   
  0.661
Vangl2
VANGL planar cell polarity 2.
    
  0.654
Aprt
Adenine phosphoribosyltransferase.
  
 
 0.598
ENSMSIP00000028035
annotation not available
  
 
 0.598
ENSMSIP00000035793
annotation not available
  
 
 0.583
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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