STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Soga1Suppressor of glucose, autophagy associated 1. (1897 aa)    
Predicted Functional Partners:
Slc35d2
Solute carrier family 35, member D2.
      
 0.548
Phip
Pleckstrin homology domain interacting protein.
      
 0.546
Gm5134
Predicted gene 5134.
      
 0.530
Gfod2
Glucose-fructose oxidoreductase domain containing 2.
      
 0.527
Tgds
TDP-glucose 4,6-dehydratase.
      
 0.526
Scyl2
SCY1-like 2 (S. cerevisiae).
      
 0.525
ENSMSIP00000016664
annotation not available
      
 0.524
Gpr155
G protein-coupled receptor 155.
      
 0.501
Haus2
HAUS augmin-like complex, subunit 2.
      
 0.439
ENSMSIP00000013998
annotation not available
      
 0.418
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.