Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lsmem1Leucine-rich single-pass membrane protein 1. (127 aa)    
Predicted Functional Partners:
ENSMSIP00000021499
annotation not available
    
   0.740
Etnppl
Ethanolamine phosphate phospholyase.
      
 0.710
Zbtb1
Zinc finger and BTB domain containing 1.
      
 0.634
ENSMSIP00000015351
annotation not available
   
  
 0.592
Lrrc2
Leucine rich repeat containing 2.
   
  
 0.543
ENSMSIP00000003188
annotation not available
      
 0.541
Rgs22
Regulator of G-protein signalling 22.
      
 0.535
Phykpl
5-phosphohydroxy-L-lysine phospholyase.
      
 0.531
Celsr1
Cadherin, EGF LAG seven-pass G-type receptor 1.
      
 0.528
Neurl2
Neuralized E3 ubiquitin protein ligase 2.
      
 0.528
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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