Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Dph6Diphthamine biosynthesis 6. (267 aa)    
Predicted Functional Partners:
Dph5
Diphthamide biosynthesis 5.
  
 
 0.923
ENSMSIP00000027941
annotation not available
    
 0.905
ENSMSIP00000029149
annotation not available
    
 0.905
Dph2
DPH2 homolog.
      
 0.872
Erbb2
Erb-b2 receptor tyrosine kinase 2.
    
   0.795
Morc1
Microrchidia 1.
    
   0.787
ENSMSIP00000035793
annotation not available
    
 0.733
Mfsd4b1
Major facilitator superfamily domain containing 4B1.
    
   0.664
ENSMSIP00000000626
annotation not available
    
   0.664
ENSMSIP00000000652
annotation not available
    
   0.664
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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