STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rnf126Ring finger protein 126. (313 aa)    
Predicted Functional Partners:
Get4
Golgi to ER traffic protein 4.
   
 
 0.951
Bag6
BCL2-associated athanogene 6.
    
 
 0.942
Asna1
arsA arsenite transporter, ATP-binding, homolog 1 (bacterial).
    
 
 0.917
ENSMSIP00000033974
annotation not available
    
 0.917
Otub1
OTU domain, ubiquitin aldehyde binding 1.
    
 0.807
Faf2
Fas associated factor family member 2.
    
 
 0.760
Scn1b
Sodium channel, voltage-gated, type I, beta.
    
   0.755
Ubxn7
UBX domain protein 7.
    
   0.751
Immt
Inner membrane protein, mitochondrial.
    
   0.743
Capn15
Calpain 15.
    
   0.728
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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