Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Snx32Sorting nexin 32. (424 aa)    
Predicted Functional Partners:
Snx2
Sorting nexin 2.
   
 0.974
Snx1
Sorting nexin 1.
   
 0.972
Snx5
Sorting nexin 5.
   
 0.966
Snx27
Sorting nexin family member 27.
    
 
 0.868
Snx4
Sorting nexin 4.
   
 0.861
Vps29
VPS29 retromer complex component.
    
 
 0.858
Snx8
Sorting nexin 8.
   
 0.856
Snx7
Sorting nexin 7.
   
 0.844
Gak
Cyclin G associated kinase.
     
  0.823
Snx30
Sorting nexin family member 30.
   
 0.822
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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