Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Fra10ac1FRA10AC1 homolog (human). (315 aa)    
Predicted Functional Partners:
Ess2
Ess-2 splicing factor.
    
 
 0.955
Cwc27
CWC27 spliceosome-associated protein.
   
 
 0.954
Cherp
Calcium homeostasis endoplasmic reticulum protein.
    
 
 0.942
Ik
IK cytokine.
   
   0.937
Sf3b2
Splicing factor 3b, subunit 2.
    
 
 0.936
Leng1
Leukocyte receptor cluster (LRC) member 1.
    
   0.929
Pithd1
PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1.
      
 0.837
Thoc1
THO complex 1.
    
 
 0.834
Prpf3
pre-mRNA processing factor 3.
    
 
 0.832
Zfp830
Zinc finger protein 830.
    
 
 0.825
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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