STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chmp4bCharged multivesicular body protein 4B. (224 aa)    
Predicted Functional Partners:
Chmp2a
Charged multivesicular body protein 2A.
    
 0.994
Chmp3
Charged multivesicular body protein 3.
   
 0.994
Chmp6
Charged multivesicular body protein 6.
    
 0.992
ENSMSIP00000034041
annotation not available
    
 0.992
ENSMSIP00000003356
annotation not available
    
 0.988
ENSMSIP00000007366
annotation not available
    
 0.986
2610002M06Rik
RIKEN cDNA 2610002M06 gene.
    
 0.984
Ptpn23
Protein tyrosine phosphatase, non-receptor type 23.
    
 0.983
ENSMSIP00000016921
annotation not available
    
 0.982
ENSMSIP00000029697
annotation not available
    
 0.982
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.