STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chmp4bCharged multivesicular body protein 4B. (224 aa)    
Predicted Functional Partners:
Chmp2a
Charged multivesicular body protein 2A.
   
 0.999
ENSMSIP00000003356
annotation not available
   
 0.997
Chmp3
Charged multivesicular body protein 3.
   
 0.997
Chmp6
Charged multivesicular body protein 6.
   
 0.997
ENSMSIP00000034041
annotation not available
    
 0.996
Chmp5
Charged multivesicular body protein 5.
   
 0.995
Chmp4c
Charged multivesicular body protein 4C.
  
 
0.995
Chmp7
Charged multivesicular body protein 7.
    
0.991
ENSMSIP00000007366
annotation not available
    
 0.983
2610002M06Rik
RIKEN cDNA 2610002M06 gene.
   
 0.983
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.