Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Defb20Defensin beta 20. (96 aa)    
Predicted Functional Partners:
ENSMSIP00000001626
annotation not available
  
  
 0.822
Defb25
Defensin beta 25.
     
 0.732
ENSMSIP00000016301
annotation not available
     
 0.726
Defb29
Defensin beta 29.
  
  
 0.721
Defb41
Defensin beta 41.
   
 
 0.666
Defb18
Defensin beta 18.
   
 
 0.664
ENSMSIP00000032688
annotation not available
     
 0.632
Defb42
Defensin beta 42.
  
  
 0.630
ENSMSIP00000001633
annotation not available
     
 0.628
Defb36
Defensin beta 36.
     
 0.625
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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