STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Defb20Defensin beta 20. (96 aa)    
Predicted Functional Partners:
Defb42
Defensin beta 42.
  
  
 0.709
ENSMSIP00000032688
annotation not available
     
 0.677
Defb18
Defensin beta 18.
   
 
 0.676
ENSMSIP00000001626
annotation not available
  
  
 0.670
ENSMSIP00000001633
annotation not available
     
 0.658
ENSMSIP00000016301
annotation not available
     
 0.647
ENSMSIP00000001621
annotation not available
     
 0.612
Spag11a
Sperm associated antigen 11A.
  
   
 0.612
Defb29
Defensin beta 29.
  
  
 0.601
Defb19
Defensin beta 19.
     
 0.596
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.