Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Fam167bFamily with sequence similarity 167, member B. (162 aa)    
Predicted Functional Partners:
Fam124a
Family with sequence similarity 124, member A.
      
 0.714
ENSMSIP00000000461
annotation not available
      
 0.579
ENSMSIP00000036587
annotation not available
      
 0.579
Fam160b2
Family with sequence similarity 160, member B2.
      
 0.517
Serpine3
Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3.
      
 0.510
Oit3
Oncoprotein induced transcript 3.
      
 0.489
Adgrl4
Adhesion G protein-coupled receptor L4.
      
 0.466
Stk33
Serine/threonine kinase 33.
      
 0.436
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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